STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000000077Sialidase-like isoform X1. (416 aa)    
Predicted Functional Partners:
SNW1
SNW domain-containing protein 1.
    
 0.728
LOC107594334
Nuclear pore complex protein Nup133-like.
   
 0.728
ENSSGRP00000108934
SNW domain containing 1.
    
 0.728
prpf19
Pre-mRNA-processing factor 19.
    
 0.726
ENSSGRP00000112991
Pre-mRNA-processing factor 19-like.
    
 0.726
ENSSGRP00000041114
XPA binding protein 2.
   
 0.722
xab2
Pre-mRNA-splicing factor SYF1 isoform X1.
   
 0.722
LOC107590859
Nuclear pore complex protein Nup107-like isoform X1.
   
 0.712
LOC107590978
Nuclear pore complex protein Nup107-like.
   
 0.712
ENSSGRP00000037365
Nucleoporin 155.
   
 0.706
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.