STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107553215Cyclin-dependent kinase-like 1. (350 aa)    
Predicted Functional Partners:
ENSSGRP00000020121
annotation not available
      
 0.524
ENSSGRP00000090245
annotation not available
      
 0.524
ENSSGRP00000006570
annotation not available
      
 0.501
ENSSGRP00000009435
annotation not available
      
 0.501
ENSSGRP00000028984
annotation not available
      
 0.501
PDZD4
PDZ domain containing 4.
      
 0.501
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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