Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSSGRP00000001002ATG9 autophagy related 9 homolog A (S. cerevisiae). (673 aa)    
Predicted Functional Partners:
LOC107554630
Autophagy-related protein 13-like.
    
 0.961
ENSSGRP00000103672
ATG13 autophagy related 13 homolog (S. cerevisiae).
    
 0.961
ENSSGRP00000023496
Beclin-1.
    
 0.923
ENSSGRP00000045850
SPT20 homolog, SAGA complex component.
   
 0.879
LOC107589048
Transcription factor SPT20 homolog isoform X1.
   
 0.879
ENSSGRP00000040027
Autophagy-related protein 2 homolog A-like.
   
 0.874
ATG2B
Autophagy-related protein 2 homolog B isoform X1.
   
 0.874
atg2a
LOW QUALITY PROTEIN: autophagy-related protein 2 homolog A.
   
 0.874
ENSSGRP00000076683
annotation not available
   
 0.874
ENSSGRP00000003828
WD repeat domain phosphoinositide-interacting protein 2.
   
 0.870
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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