STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001010AT rich interactive domain 1B (SWI1-like). (1812 aa)    
Predicted Functional Partners:
LOC107601252
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
    
 0.891
LOC107590406
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
    
 0.891
ENSSGRP00000017841
annotation not available
    
 0.868
LOC107600005
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 0.868
LOC107602851
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 0.868
ENSSGRP00000100414
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b.
    
 0.868
ENSSGRP00000035434
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.
   
 0.863
ENSSGRP00000079717
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.
   
 0.863
ENSSGRP00000046039
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
   
 0.858
smarcc2
SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C.
   
 0.858
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.