Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107555422Sentrin-specific protease 2 (axin associating molecule). (591 aa)    
Predicted Functional Partners:
ENSSGRP00000059513
Small ubiquitin-related modifier 1-like.
   
 0.954
Sumo1
Small ubiquitin-related modifier 1.
   
 0.954
LOC107594334
Nuclear pore complex protein Nup133-like.
   
 
 0.886
LOC107596521
Small ubiquitin-related modifier 3-like.
   
 0.885
sumo2
Small ubiquitin like modifier 2.
   
 0.869
LOC107573531
Small ubiquitin-related modifier 3-like.
   
 0.869
ENSSGRP00000029291
annotation not available
   
 0.869
ENSSGRP00000052163
Small ubiquitin-related modifier 3-like isoform X1.
   
 0.869
SUMO3
Small ubiquitin-related modifier 3-like.
   
 0.869
LOC107581380
Small ubiquitin-related modifier 3-like.
   
 0.869
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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