Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001024Pejvakin-like isoform X1. (356 aa)    
Predicted Functional Partners:
ENSSGRP00000030815
Spectrin alpha chain, non-erythrocytic 1-like isoform X1.
    
  0.633
Sptan1
Spectrin alpha chain, non-erythrocytic 1 isoform X1.
    
  0.633
LOC107592160
Caspase-1-like.
    
 0.594
ENSSGRP00000034416
Caspase-1-like.
    
 0.594
ENSSGRP00000016372
Xin actin binding repeat containing 2b.
     
 0.575
ENSSGRP00000054591
Xin actin-binding repeat-containing protein 2-like isoform X1.
     
 0.575
ENSSGRP00000077616
Xin actin binding repeat containing 2b.
     
 0.575
LOC107589818
Xin actin-binding repeat-containing protein 1-like isoform X1.
     
 0.575
LOC107585289
Xin actin-binding repeat-containing protein 1-like isoform X1.
     
 0.575
LOC107581361
Xin actin-binding repeat-containing protein 2-like isoform X1.
     
 0.575
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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