STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107571733Uncharacterized protein C2orf47 homolog, mitochondrial-like. (244 aa)    
Predicted Functional Partners:
ENSSGRP00000060507
Prohibitin.
    
 0.703
phb
Prohibitin 1.
    
 0.703
LOC107600342
Paraplegin-like isoform X1.
    
 0.689
ENSSGRP00000033895
SPG7 matrix AAA peptidase subunit, paraplegin.
    
 0.689
ENSSGRP00000021460
Essential MCU regulator, mitochondrial-like.
     
 0.682
ENSSGRP00000021461
Single-pass membrane protein with aspartate-rich tail 1a.
     
 0.682
LOC107598503
Essential MCU regulator, mitochondrial-like.
     
 0.682
LOC107594281
Essential MCU regulator, mitochondrial-like.
     
 0.682
ENSSGRP00000003547
AFG3-like protein 1.
    
 0.629
LOC107570650
AFG3 family protein.
    
 0.629
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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