Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107563994Serine/threonine-protein phosphatase alpha-2 isoform. (334 aa)    
Predicted Functional Partners:
LOC107550069
Cleavage and polyadenylation specificity factor subunit 1-like.
    
 0.970
ENSSGRP00000027190
Pre-mRNA 3'-end-processing factor FIP1-like.
    
 0.953
ENSSGRP00000055874
COMPASS component SWD2.
   
 0.948
LOC107584451
WD repeat-containing protein 82.
   
 0.948
ENSSGRP00000028599
Retinoblastoma 1.
   
  0.941
LOC107548180
Retinoblastoma-associated protein-like.
   
  0.941
LOC107549104
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.930
ENSSGRP00000058361
Cleavage and polyadenylation specificity factor subunit 2-like.
   
 0.930
LOC107601862
Cleavage and polyadenylation specificity factor subunit 3-like.
   
 0.930
ENSSGRP00000098667
Cleavage and polyadenylation specific factor 2.
   
 0.930
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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