STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAP1THAP domain-containing protein 1-like isoform X1. (228 aa)    
Predicted Functional Partners:
LOC107550081
Uncharacterized protein LOC107550081.
    
0.657
ENSSGRP00000104903
Uncharacterized protein LOC107563930.
    
 0.657
ENSSGRP00000026116
PRKC, apoptosis, WT1, regulator.
    
 
 0.620
ENSSGRP00000083047
PRKC apoptosis WT1 regulator protein-like.
    
 
 0.620
LOC107595499
Cip1-interacting zinc finger protein-like.
    
 0.486
ENSSGRP00000067069
Cdkn1a interacting zinc finger protein 1a.
    
 0.486
LOC107561400
Mediator of RNA polymerase II transcription subunit 7-like.
   
  0.458
zbtb49
Zinc finger and BTB domain-containing protein 49 isoform X1.
      
 0.457
LOC107586270
52 kDa repressor of the inhibitor of the protein kinase-like.
    
 
 0.453
LOC107577326
52 kDa repressor of the inhibitor of the protein kinase-like.
    
 
 0.453
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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