Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
THAP1THAP domain-containing protein 1-like isoform X1. (228 aa)    
Predicted Functional Partners:
LOC107568993
Nuclear pore complex protein Nup62.
    
   0.709
LOC107574190
Nuclear pore complex protein Nup62.
    
   0.709
LOC107550081
Uncharacterized protein LOC107550081.
    
 0.685
ENSSGRP00000104903
Uncharacterized protein LOC107563930.
    
 0.685
ENSSGRP00000026116
PRKC, apoptosis, WT1, regulator.
    
 
 0.667
ENSSGRP00000083047
PRKC apoptosis WT1 regulator protein-like.
    
 
 0.667
LOC107586270
52 kDa repressor of the inhibitor of the protein kinase-like.
    
 
 0.552
LOC107577326
52 kDa repressor of the inhibitor of the protein kinase-like.
    
 
 0.552
LOC107588761
52 kDa repressor of the inhibitor of the protein kinase-like.
    
 
 0.552
LOC107597535
52 kDa repressor of the inhibitor of the protein kinase-like isoform X1.
    
 
 0.552
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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