STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107587801Protein tyrosine phosphatase type IVA 3. (173 aa)    
Predicted Functional Partners:
RABGGTB
Geranylgeranyl transferase type-2 subunit beta-like isoform X1.
    
 0.720
ENSSGRP00000010436
annotation not available
    
 
 0.436
CNNM3
Metal transporter CNNM3 isoform X1.
    
 
 0.436
ENSSGRP00000029488
Cyclin and CBS domain divalent metal cation transport mediator 4a.
    
 
 0.436
LOC107585325
Metal transporter CNNM2-like isoform X1.
    
 
 0.436
ENSSGRP00000064290
Metal transporter CNNM2-like.
    
 
 0.436
LOC107588659
Metal transporter CNNM2-like isoform X1.
    
 
 0.436
LOC107599606
Metal transporter CNNM4-like.
    
 
 0.436
ENSSGRP00000086465
annotation not available
    
 
 0.436
LOC107567757
Metal transporter CNNM4-like.
    
 
 0.436
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.