STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107588343Transmembrane protein 109-like. (152 aa)    
Predicted Functional Partners:
ENSSGRP00000089090
Uncharacterized protein LOC107549827.
  
     0.500
ENSSGRP00000011902
Uncharacterized protein LOC107554336.
  
     0.491
ENSSGRP00000091553
Uncharacterized protein LOC107594346.
  
     0.475
LOC107558007
Zinc fingers and homeoboxes protein 1-like.
  
     0.474
LOC107591388
Homeobox and leucine zipper protein Homez-like.
  
     0.474
ENSSGRP00000011831
Uncharacterized protein LOC107571798.
  
     0.466
ENSSGRP00000029570
annotation not available
  
     0.465
ENSSGRP00000091554
annotation not available
  
     0.463
ENSSGRP00000029568
annotation not available
  
     0.462
ENSSGRP00000007894
annotation not available
  
     0.460
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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