STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001085IK cytokine. (472 aa)    
Predicted Functional Partners:
ENSSGRP00000049189
SMU1 DNA replication regulator and spliceosomal factor b.
   
 0.975
LOC107551459
WD40 repeat-containing protein SMU1.
   
 0.975
ENSSGRP00000078025
WD40 repeat-containing protein SMU1-like.
   
 0.975
ENSSGRP00000078330
SMU1 DNA replication regulator and spliceosomal factor a.
   
 0.975
ENSSGRP00000087764
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
   
 0.962
PRPF6
Pre-mRNA-processing factor 6 isoform X1.
   
 0.962
LOC107578434
Microfibrillar-associated protein 1-like.
   
 0.929
LOC107600470
Microfibrillar-associated protein 1-like.
   
 0.929
ENSSGRP00000103133
Microfibrillar-associated protein 1-like.
   
 0.929
ENSSGRP00000007511
annotation not available
   
  0.859
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.