STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107584103Casein kinase 1, epsilon. (424 aa)    
Predicted Functional Partners:
ENSSGRP00000046341
annotation not available
    
 0.971
ENSSGRP00000009028
annotation not available
    
 0.970
ltv1
Protein LTV1 homolog isoform X1.
    
 0.970
LOC107568923
Axin 1.
    
 0.964
ENSSGRP00000038959
Axin-1-like.
    
 0.964
ENSSGRP00000029082
Axin-1-like isoform X1.
    
 0.962
LOC107556609
Axin 2.
    
 0.960
LOC107555085
Axin-2-like.
    
 0.960
LOC107572361
Essential nuclear protein 1.
    
 0.937
LOC107569751
Essential nuclear protein 1.
    
 0.937
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.