Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107584103Casein kinase 1, epsilon. (424 aa)    
Predicted Functional Partners:
ENSSGRP00000106720
Smoothened homolog.
    
  0.977
ENSSGRP00000046341
annotation not available
   
 0.970
LOC107556609
Axin 2.
    
 0.947
LOC107555085
Axin-2-like.
    
 0.947
ENSSGRP00000009028
annotation not available
    
 0.934
ltv1
Protein LTV1 homolog isoform X1.
    
 0.934
LOC107583820
Aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1.
    
 0.932
LOC107572361
Essential nuclear protein 1.
    
 0.926
LOC107569751
Essential nuclear protein 1.
    
 0.926
LOC107585596
Pre-rRNA-processing protein TSR1 homolog.
    
 0.922
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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