Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000001089E3 ubiquitin-protein ligase Jade-2. (499 aa)    
Predicted Functional Partners:
LOC107577758
Chromatin modification-related protein MEAF6-like.
    
 0.951
meaf6
Chromatin modification-related protein MEAF6 isoform X1.
    
 0.951
ENSSGRP00000021398
Inhibitor of growth protein 5-like.
    
 0.888
ENSSGRP00000021400
Inhibitor of growth protein 5-like.
    
 0.888
LOC107599521
Inhibitor of growth protein 4-like isoform X1.
    
 0.888
ENSSGRP00000102979
Inhibitor of growth family, member 5a.
    
 0.888
LOC107589396
Inhibitor of growth protein 4-like.
    
 0.888
ENSSGRP00000005957
annotation not available
    
 0.760
ing3
Inhibitor of growth protein 3 isoform X1.
    
 0.760
ENSSGRP00000011944
Inhibitor of growth family, member 3.
    
 0.760
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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