Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107560201Transmembrane protein 242. (141 aa)    
Predicted Functional Partners:
siae
Sialate O-acetylesterase.
      
 0.814
LOC107555767-2
TFIIH basal transcription factor complex TTD-A subunit.
      
 0.783
Urb1
Nucleolar pre-ribosomal-associated protein 1.
      
 0.683
LOC107555767
Protein SERAC1-like.
      
 0.682
ENSSGRP00000092615
Protein SERAC1.
      
 0.682
ENSSGRP00000055064
Transcription factor B1, mitochondrial.
      
 0.654
ENSSGRP00000068188
Transcription factor B1, mitochondrial.
      
 0.654
LOC107584365
Transmembrane protein 70, mitochondrial-like.
      
 0.625
LOC107550710
Transmembrane protein 70, mitochondrial-like isoform X1.
      
 0.625
LOC107596721
Transmembrane protein 196-like.
      
 0.617
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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