Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107560204Galectin-8-like isoform X1. (316 aa)    
Predicted Functional Partners:
LOC107596651
Tax1-binding protein 1 homolog B-like isoform X1.
    
 
 0.814
LOC107550830
Tax1-binding protein 1 homolog B isoform X1.
    
 
 0.814
Vps13a
Vacuolar protein sorting-associated protein 13A/C.
    
 
 0.733
ENSSGRP00000014265
Tax1 (human T-cell leukemia virus type I) binding protein 1a.
    
 
 0.718
LOC107592002
Tax1-binding protein 1 homolog A-like isoform X1.
    
 
 0.718
lyrm9
LYR motif-containing protein 9.
      
 0.635
LOC107601250
Integrin alpha-3-like isoform X1.
    
 
 0.625
itga3
Integrin alpha 3.
    
 
 0.625
LOC107557321
Integrin alpha-3-like.
    
 
 0.625
ENSSGRP00000108829
Integrin, alpha 3a.
    
 
 0.625
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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