Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107584104Transmembrane protein 184B-like isoform X1. (425 aa)    
Predicted Functional Partners:
LOC107565197
Lysosomal-associated transmembrane protein 4B-like.
   
 
 0.627
LOC107556382
Lysosomal-associated transmembrane protein 4B-like.
   
 
 0.627
tmem214
Transmembrane protein 214.
      
 0.541
LOC107552995
Gamma-aminobutyric acid receptor-associated protein.
    
   0.538
LOC107552995-2
Gamma-aminobutyric acid receptor-associated protein.
    
   0.538
LOC107599946
Gamma-aminobutyric acid receptor-associated protein-like.
    
   0.538
ENSSGRP00000074074
Gamma-aminobutyric acid receptor-associated protein-like.
    
   0.538
GABARAPL2
GABA type A receptor associated protein like 2.
    
   0.538
LOC107560072
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
   0.538
morn4
MORN repeat-containing protein 4.
      
 0.535
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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