STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107598694Vacuolar protein sorting-associated protein 35-like. (796 aa)    
Predicted Functional Partners:
ENSSGRP00000051108
Vacuolar protein sorting-associated protein 26A-like.
   
 0.997
vps26a
Vacuolar protein sorting-associated protein 26A.
   
 0.997
LOC107595689
Vacuolar protein sorting-associated protein 29-like.
   
 0.996
LOC107556946
Vacuolar protein sorting-associated protein 29 isoform X1.
   
 0.996
LOC107582573
Vacuolar protein sorting-associated protein 26B.
   
 0.976
LOC107597524
Vacuolar protein sorting-associated protein 26B-like.
   
 0.976
ENSSGRP00000004269
annotation not available
   
 0.975
ENSSGRP00000027721
Vacuolar protein sorting-associated protein 26B-like.
   
 0.975
LOC107588734
Vacuolar protein sorting-associated protein 26B-like.
   
 0.975
ENSSGRP00000002752
Sorting nexin-12-like.
   
 0.963
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.