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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107554835Ubiquinol-cytochrome c reductase subunit 8. (82 aa)    
Predicted Functional Partners:
CYTB
Ubiquinol-cytochrome c reductase cytochrome b subunit.
    
 0.999
ENSSGRP00000012525
Ubiquinol-cytochrome c reductase subunit 9.
   
 0.999
Ndufb9
LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9.
   
 0.999
LOC107591644
Ubiquinol-cytochrome c reductase subunit 7.
   
 0.999
ENSSGRP00000052703
Cytochrome c oxidase subunit 7C.
   
 0.999
COX7C
Cytochrome c oxidase subunit 7C.
   
 0.999
ENSSGRP00000058378
annotation not available
   
 0.999
LOC107585396
Ubiquinol-cytochrome c reductase subunit 9.
   
 0.999
LOC107596837
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 0.999
LOC107554183
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 0.999
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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