STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001152annotation not available (130 aa)    
Predicted Functional Partners:
LOC107572061
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.605
LOC107561400
Mediator of RNA polymerase II transcription subunit 7-like.
    
   0.548
ENSSGRP00000030736
Mitochondrial methionyl-tRNA formyltransferase.
  
   0.539
LOC107596429
Methionyl-tRNA formyltransferase, mitochondrial-like.
  
   0.539
LOC107585843
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1.
    
 0.528
tab3
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1.
    
 0.528
TAB2
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like.
    
 0.528
tab2
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1.
    
 0.528
ENSSGRP00000022028
Family with sequence similarity 131 member A.
      
 0.524
LOC107563308
Protein FAM131A-like.
      
 0.524
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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