Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107567301Insulin-like growth factor-binding protein 2-B. (266 aa)    
Predicted Functional Partners:
Smad7
Mothers against decapentaplegic homolog 7.
      
 0.603
LOC107585655
Mothers against decapentaplegic homolog 7-like.
      
 0.603
LOC107602431
Growth/differentiation factor 2-like isoform X1.
      
 0.601
ENSSGRP00000029033
Growth differentiation factor 2.
      
 0.601
LOC107550052
Protein phosphatase 1B-like isoform X1.
      
 0.601
LOC107582773
Protein phosphatase 1B-like.
      
 0.601
LOC107561311
General transcription factor IIF subunit 2-like.
      
 0.575
ENSSGRP00000112499
Transcription initiation factor TFIIF subunit beta.
      
 0.575
MDFIC2
MyoD family inhibitor domain containing 2.
      
 0.528
MDFIC2-2
MyoD family inhibitor domain-containing protein-like isoform X1.
      
 0.528
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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