STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001164MAM and LDL receptor class A domain containing 1. (1537 aa)    
Predicted Functional Partners:
LOC107598686
Phosphorylase b kinase regulatory subunit beta-like isoform X1.
      
 0.482
LOC107591034
Phosphorylase b kinase regulatory subunit beta-like isoform X1.
      
 0.482
rmi2
RecQ-mediated genome instability protein 2.
      
 0.420
ENSSGRP00000037943
RecQ mediated genome instability 2.
      
 0.420
suclg2
Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial isoform X1.
      
 0.420
ENSSGRP00000106639
succinate-CoA ligase, GDP-forming, beta subunit.
      
 0.420
LOC107556518
T-cell surface glycoprotein CD5-like.
   
 
 0.411
ENSSGRP00000000924
Amyloid beta (A4) precursor-like protein 1.
   
 0.409
ENSSGRP00000005521
annotation not available
   
 0.409
ENSSGRP00000032874
Amyloid beta A4 protein-like.
   
 0.409
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.