Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
igsf11Immunoglobulin superfamily member 11 isoform X1. (439 aa)    
Predicted Functional Partners:
LOC107560658
Immunoglobulin superfamily member 11-like isoform X1.
     
  0.912
LOC107568522
V-type immunoglobulin domain-containing suppressor of T-cell activation.
     
 0.902
LOC107549146
V-type immunoglobulin domain-containing suppressor of T-cell activation.
     
 0.902
LOC107566538
Gap junction alpha-5 protein-like.
      
 0.826
LOC107603053
Gap junction alpha-5 protein-like.
      
 0.826
Mc1r
Melanocyte-stimulating hormone receptor.
      
 0.709
LOC107553599
Aquaporin-3-like.
   
  
 0.673
LOC107552570
Aquaporin-3-like isoform X1.
   
  
 0.673
ppp1r36
Protein phosphatase 1 regulatory subunit 36 isoform X1.
      
 0.658
ENSSGRP00000049214
Tight junction protein ZO-1-like isoform X1.
      
 0.604
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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