Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
LOC107560205Galactocerebrosidase. (660 aa)    
Predicted Functional Partners:
LOC107556869
Sphingomyelin phosphodiesterase-like.
     
 0.928
ENSSGRP00000092246
Ceramide kinase.
     
 0.913
LOC107600182
Acid ceramidase-like isoform X1.
     
 0.904
ENSSGRP00000091254
Glucosidase, beta (bile acid) 2.
     
 0.903
gba2
Non-lysosomal glucosylceramidase.
     
 0.903
ugt8
2-hydroxyacylsphingosine 1-beta-galactosyltransferase.
     
 0.893
ENSSGRP00000098236
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like isoform X1.
     
 0.893
ENSSGRP00000011251
annotation not available
     
 0.887
ENSSGRP00000042075
Arylsulfatase A-like.
     
 0.887
LOC107599918
Arylsulfatase A-like.
     
 0.887
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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