Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001203ATP-binding cassette, subfamily B (MDR/TAP), member 9. (270 aa)    
Predicted Functional Partners:
ENSSGRP00000011056
TAP binding protein (tapasin).
   
 0.857
ENSSGRP00000015068
annotation not available
   
 0.857
ENSSGRP00000027208
TAP binding protein (tapasin).
   
 0.857
ENSSGRP00000088919
annotation not available
   
 0.857
ENSSGRP00000027365
annotation not available
   
 0.758
ENSSGRP00000054316
Proteasome subunit beta type-9-like.
   
 0.758
LOC107549857
Proteasome subunit beta type-9-like.
   
 0.758
ENSSGRP00000026767
annotation not available
    
 0.711
abcb7
ATP-binding cassette sub-family B member 7, mitochondrial.
    
 0.711
LOC107596689
Tapasin-related protein-like.
   
 
 0.692
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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