STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107598695Plexin domain-containing protein 2-like. (527 aa)    
Predicted Functional Partners:
ENSSGRP00000066952
Voltage-dependent L-type calcium channel subunit beta-4-like.
      
 0.743
ENSSGRP00000102743
Nebulette.
      
 0.742
ENSSGRP00000102745
Nebulette.
      
 0.742
Nebl
Nebulette.
      
 0.742
LOC107591025
ADP-ribosylation factor-like protein 5B isoform X1.
      
 0.730
LOC107573930
Beta-enolase.
      
 0.546
ENSSGRP00000068489
CTS telomere maintenance complex component 1.
      
 0.546
LOC107570947
Alpha-2,8-sialyltransferase 8F-like.
      
 0.491
LOC107567442
Alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8F).
      
 0.491
LOC107560425
Type-1 angiotensin II receptor-associated protein-like.
      
 0.453
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.