STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107567304Kelch-like protein 1/4/5. (492 aa)    
Predicted Functional Partners:
ENSSGRP00000003997
Bardet-Biedl syndrome 1 protein-like.
    
 0.777
LOC107573626
Cullin-3-B-like.
    
 0.742
LOC107551306
Cullin 3.
    
 0.742
ENSSGRP00000060541
Cullin-3-like.
    
 0.742
LOC107567698
Cullin-3-B-like isoform X1.
    
 0.742
bbs7
Bardet-Biedl syndrome 7 protein.
   
 0.717
ENSSGRP00000005442
RING-box protein 1.
    
 0.712
rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.712
ENSSGRP00000035245
Bardet-Biedl syndrome 9.
    
 0.689
ENSSGRP00000087436
Bardet-Biedl syndrome 9.
    
 0.689
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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