STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001228Retinol dehydrogenase 12-like. (365 aa)    
Predicted Functional Partners:
pnpla4
Patatin-like phospholipase domain-containing protein 4.
     
 0.914
LOC107593009
Retinal dehydrogenase 2-like.
  
 0.754
ENSSGRP00000029405
Aldehyde dehydrogenase family 1 member A3-like.
  
 0.754
LOC107585984
Retinal dehydrogenase 2-like.
  
 0.754
Aldh1a3
Aldehyde dehydrogenase family 1 member A3.
  
 0.754
LOC107596578
Cytochrome P450 family 26 subfamily A.
   
 
 0.735
LOC107593523
Cytochrome P450 family 26 subfamily A.
   
 
 0.735
ENSSGRP00000060974
All-trans-retinol 3,4-desaturase.
   
 
 0.713
LOC107581347
All-trans-retinol 3,4-desaturase.
   
 
 0.713
LOC107562027
Putative all-trans-retinol 13,14-reductase.
    
 0.709
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.