Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001271Elongation factor 1 alpha-like protein. (419 aa)    
Predicted Functional Partners:
eef1g
Elongation factor 1-gamma.
   
 0.989
ENSSGRP00000052493
Eukaryotic translation elongation factor 1 gamma.
   
 0.989
ENSSGRP00000008040
Eukaryotic peptide chain release factor subunit 1-like.
   
 0.953
ENSSGRP00000095182
annotation not available
   
 0.953
ENSSGRP00000099024
Eukaryotic peptide chain release factor subunit 1-like.
   
 0.953
LOC107588313
Eukaryotic peptide chain release factor subunit 1-like isoform X1.
   
 0.953
LOC107552075
Eukaryotic peptide chain release factor subunit 1.
   
 0.953
FAU
Small subunit ribosomal protein S30e.
   
 0.914
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
 0.914
LOC107567395
Small subunit ribosomal protein S30e.
   
 0.914
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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