STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001271Elongation factor 1 alpha-like protein. (419 aa)    
Predicted Functional Partners:
eef1g
Elongation factor 1-gamma.
   
 0.999
ENSSGRP00000052493
Eukaryotic translation elongation factor 1 gamma.
   
 0.999
LOC107582043
Valine--tRNA ligase-like isoform X1.
   
 0.912
ENSSGRP00000041350
Valine--tRNA ligase-like.
   
 0.912
LOC107554042
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.
  
  
 
0.901
LOC107590378
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like.
  
  
 
0.901
Mars
Methionine--tRNA ligase, cytoplasmic.
   
 0.891
ENSSGRP00000008040
Eukaryotic peptide chain release factor subunit 1-like.
   
 0.878
ENSSGRP00000095182
annotation not available
   
 0.878
ENSSGRP00000099024
Eukaryotic peptide chain release factor subunit 1-like.
   
 0.878
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.