Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001277annotation not available (121 aa)    
Predicted Functional Partners:
LOC107563270
Ras-related protein Rab-27B-like isoform X1.
     
 0.575
LOC107600376
Ras-related protein Rab-27A-like.
     
 0.575
ENSSGRP00000090475
annotation not available
     
 0.575
ENSSGRP00000097579
Ras-related protein Rab-27B-like.
     
 0.575
LOC107589682
Keratinocyte-associated protein 3-like.
   
    0.486
LOC107586576
Keratinocyte-associated protein 3-like isoform X1.
   
    0.486
ENSSGRP00000085901
V-set and immunoglobulin domain-containing protein 2-like.
   
    0.461
ENSSGRP00000101544
Thrombospondin type-1 domain-containing protein 7B-like.
      
 0.461
ENSSGRP00000023207
annotation not available
   
    0.455
tmem214
Transmembrane protein 214.
      
 0.444
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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