STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001279Transmembrane protein 238-like. (112 aa)    
Predicted Functional Partners:
LOC107580248
Synaptojanin-2-binding protein-like.
    
 0.532
ENSSGRP00000019095
annotation not available
    
 0.532
LOC107553210
Synaptojanin-2-binding protein-like isoform X1.
    
 0.532
ENSSGRP00000020440
Voltage-dependent T-type calcium channel subunit alpha-1G-like.
    
 0.434
ENSSGRP00000024925
Voltage-dependent T-type calcium channel subunit alpha-1I-like.
    
 0.434
ENSSGRP00000025671
annotation not available
    
 0.434
ENSSGRP00000027392
annotation not available
    
 0.434
ENSSGRP00000035615
Calcium channel, voltage-dependent, T type, alpha 1H subunit b.
    
 0.434
ENSSGRP00000049301
Voltage-dependent T-type calcium channel subunit alpha-1H-like.
    
 0.434
ENSSGRP00000049307
Calcium channel, voltage-dependent, T type, alpha 1H subunit a.
    
 0.434
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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