Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001279Transmembrane protein 238-like. (112 aa)    
Predicted Functional Partners:
LOC107581333
Tartrate-resistant acid phosphatase type 5-like.
      
 0.504
ENSSGRP00000011528
WD repeat domain 90.
    
   0.500
LOC107570282
Large subunit ribosomal protein L10e.
      
 0.484
ENSSGRP00000047297
Ribosomal protein L10.
      
 0.484
ldah
Lipid droplet-associated hydrolase.
      
 0.462
ENSSGRP00000087181
Lipid droplet associated hydrolase.
      
 0.462
LOC107552400
Sulfotransferase 6B1-like.
      
 0.460
LOC107557424
Sulfotransferase 6B1-like.
      
 0.460
ENSSGRP00000077803
LOW QUALITY PROTEIN: transmembrane protein 97-like.
    
 
 0.458
ENSSGRP00000081659
annotation not available
    
 
 0.458
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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