Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107572218Guanylate-binding protein 1/3/4/7. (635 aa)    
Predicted Functional Partners:
xpnpep1
Xaa-Pro aminopeptidase 1.
    
 
 0.605
pggt1b
Geranylgeranyl transferase type-1 subunit beta.
     
  0.557
LOC107598957
Serine/threonine-protein kinase pim-3-like.
     
  0.462
LOC107598956
LOW QUALITY PROTEIN: serine/threonine-protein kinase pim-1-like.
     
  0.462
PIM1
Proto-oncogene serine/threonine-protein kinase Pim-1.
     
  0.462
LOC107578911
Furin-like.
   
 
 0.452
ENSSGRP00000022173
Furin-like.
   
 
 0.452
LOC107581806
Furin-1-like.
   
 
 0.452
ENSSGRP00000072994
Furin-like.
   
 
 0.452
ENSSGRP00000079988
Furin (paired basic amino acid cleaving enzyme) a.
   
 
 0.452
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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