Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001283Sorting nexin 29. (713 aa)    
Predicted Functional Partners:
ENSSGRP00000056389
Si:dkey-208b23.5.
      
 0.718
ENSSGRP00000074172
Sorting nexin 20.
   
 
 0.679
ENSSGRP00000016161
Thioredoxin domain containing 11.
      
 0.652
ENSSGRP00000075645
Ribosomal protein S6 kinase polypeptide 1.
   
 
 0.652
ENSSGRP00000064613
AP-2 complex subunit mu-like.
   
   0.651
ENSSGRP00000088719
AP-2 complex subunit mu-A-like isoform X1.
   
   0.651
ENSSGRP00000106142
AP-2 complex subunit mu-B-like.
   
   0.651
LOC107593770
AP-2 complex subunit mu-A isoform X1.
   
   0.651
LOC107551528
Sorting nexin-21-like.
   
 
 0.647
ENSSGRP00000071580
Sorting nexin family member 21.
   
 
 0.647
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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