Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107584108Protein shisa-9A. (384 aa)    
Predicted Functional Partners:
ENSSGRP00000011618
AT-rich interactive domain-containing protein 4A-like.
   
 0.791
ENSSGRP00000061731
AT rich interactive domain 4A (RBP1-like).
   
 0.791
ENSSGRP00000087320
AT-rich interactive domain-containing protein 4B-like.
   
 0.791
Arid4a
AT-rich interactive domain-containing protein 4A.
   
 0.791
LOC107577758
Chromatin modification-related protein MEAF6-like.
   
 0.779
meaf6
Chromatin modification-related protein MEAF6 isoform X1.
   
 0.779
ENSSGRP00000012988
Transformation/transcription domain-associated protein-like.
   
 0.707
ENSSGRP00000067675
Transformation/transcription domain-associated protein-like.
   
 0.707
LOC107585836
DNA methyltransferase 1-associated protein 1-like.
   
 0.681
LOC107548533
DNA methyltransferase 1-associated protein 1-like.
   
 0.681
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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