STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001288Calcineurin-like phosphoesterase domain containing 1. (295 aa)    
Predicted Functional Partners:
ENSSGRP00000006386
annotation not available
   
 0.860
nudt12
Peroxisomal NADH pyrophosphatase NUDT12.
   
 0.860
LOC107581629
Delta-1-pyrroline-5-carboxylate synthase-like.
     
 0.672
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
     
 0.672
LOC107571754
Pseudouridine-5'-phosphatase-like isoform X1.
  
  
 0.650
LOC107602763
Pseudouridine-5'-phosphatase-like.
  
  
 0.650
pnpla4
Patatin-like phospholipase domain-containing protein 4.
      
 0.621
ENSSGRP00000101909
Patatin-like phospholipase domain containing 4.
      
 0.621
ENSSGRP00000016161
Thioredoxin domain containing 11.
     
 0.620
ENSSGRP00000028329
Centrosomal protein of 57 kDa-like.
      
 0.619
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.