Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001292Family with sequence similarity 131 member C. (241 aa)    
Predicted Functional Partners:
Anapc1
Anaphase-promoting complex subunit 1.
      
 0.641
ENSSGRP00000033118
Nodal modulator.
      
 0.632
ENSSGRP00000082926
Nodal modulator 1-like.
      
 0.632
ENSSGRP00000012554
annotation not available
      
 0.617
ENSSGRP00000065644
annotation not available
      
 0.617
ENSSGRP00000000238
Sushi domain-containing protein 2-like.
      
 0.615
SUSD2
Sushi domain-containing protein 2-like.
      
 0.615
LOC107584273
Visinin-like protein 1.
    
   0.613
LOC107601537
Visinin-like protein 1.
    
   0.613
LOC107594066
Visinin-like protein 1.
    
   0.613
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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