STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001301Excision repair cross-complementation group 4. (793 aa)    
Predicted Functional Partners:
ercc1
DNA excision repair protein ERCC-1.
   
 0.996
ENSSGRP00000105732
DNA excision repair protein ERCC-1-like.
   
 0.996
ENSSGRP00000083488
WRN RecQ like helicase.
   
 0.985
fancf
Fanconi anemia group F protein.
    
 0.981
ENSSGRP00000051038
FA complementation group B.
   
 0.980
ENSSGRP00000000773
LOW QUALITY PROTEIN: uncharacterized protein LOC107565010.
    
 0.976
ENSSGRP00000005593
annotation not available
    
 0.976
ENSSGRP00000095199
Uncharacterized protein LOC107557956.
    
 0.976
top3a
DNA topoisomerase 3-alpha.
    
 0.975
ENSSGRP00000073714
annotation not available
  
 0.974
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.