Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001309Proteasome subunit beta type-4-like. (260 aa)    
Predicted Functional Partners:
ENSSGRP00000016799
Proteasome subunit alpha type-1-like.
   
 0.998
psma1
Proteasome subunit alpha type-1.
   
 0.998
psma5
Proteasome subunit alpha type-5.
   
 0.998
ENSSGRP00000032367
Proteasome subunit beta type-3-like.
   
 0.998
LOC107597712
Proteasome subunit beta type-1-A.
   
0.998
PSMB1
Proteasome subunit beta type-1-A-like.
   
0.998
ENSSGRP00000061741
Proteasome subunit alpha type-3.
   
 0.998
LOC107592948
Proteasome subunit beta type-2-like.
   
 0.998
LOC107560014
Proteasome subunit alpha type-4.
   
 0.998
LOC107582453
Proteasome subunit alpha type-5-like.
   
 0.998
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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