STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107591612Digestive cysteine proteinase 2-like. (556 aa)    
Predicted Functional Partners:
LOC107590861
UPF0235 protein C15orf40 homolog.
    
  0.459
pole2
DNA polymerase epsilon subunit 2 isoform X1.
    
   0.448
ENSSGRP00000039008
Lectin, mannose-binding 1.
     
 0.429
ENSSGRP00000098896
Lectin, mannose-binding, 1.
     
 0.429
tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
 
 0.415
LOC107562731
Protein transport protein SEC13.
    
  0.407
LOC107557974
Protein transport protein SEC13.
    
  0.407
LOC107567331
Cathepsin O-like.
   
0.403
LOC107559296
Cathepsin F-like.
   
0.403
LOC107587086
Cathepsin F-like isoform X1.
   
0.403
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.