Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107591612Digestive cysteine proteinase 2-like. (556 aa)    
Predicted Functional Partners:
ENSSGRP00000004167
Cathepsin D-like.
   
 0.434
ENSSGRP00000011074
annotation not available
   
 0.434
LOC107569115
Cathepsin E-A-like.
   
 0.434
ENSSGRP00000023629
annotation not available
   
 0.434
ENSSGRP00000030954
LOW QUALITY PROTEIN: cathepsin D-like.
   
 0.434
ctsd
Cathepsin D.
   
 0.434
LOC107570508
Renin-like.
   
 0.434
ENSSGRP00000109011
annotation not available
   
 0.434
LOC107550929
Renin-like.
   
 0.434
LOC107587480
Interferon-induced transmembrane protein 1-like.
   
 0.432
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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