Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001344Zgc:92380. (488 aa)    
Predicted Functional Partners:
LOC107559866
Intermediate filament protein ON3-like.
   
 0.665
LOC107585134
Intermediate filament protein ON3-like.
   
 0.665
LOC107550069
Cleavage and polyadenylation specificity factor subunit 1-like.
    
  0.577
LOC107600916
Retinol dehydrogenase 12-like isoform X1.
   
 0.560
LOC107584669
Retinol dehydrogenase 12-like isoform X1.
   
 0.560
LOC107582046
INO80 complex subunit E-like isoform X1.
   
  0.524
ENSSGRP00000027190
Pre-mRNA 3'-end-processing factor FIP1-like.
    
  0.510
LOC107593917
Olfactomedin-like protein 3B.
      
 0.507
LOC107591119
Olfactomedin-like protein 3B.
      
 0.507
ENSSGRP00000055874
COMPASS component SWD2.
    
 0.488
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.