STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001346Galactosidase, alpha. (276 aa)    
Predicted Functional Partners:
ENSSGRP00000033070
Galactokinase-like.
   
 
 0.579
galk1
Galactokinase isoform X1.
   
 
 0.579
LOC107589326
N-acetylgalactosamine kinase-like.
   
 
 0.579
LOC107596522
Beta-galactosidase-like.
  
 
 0.565
ENSSGRP00000003212
annotation not available
  
 
 0.564
glb1
Beta-galactosidase.
  
 
 0.559
ENSSGRP00000105168
Beta-galactosidase-1-like protein 2.
  
 
 0.544
ENSSGRP00000061728
Beta-galactosidase-1-like protein 2.
  
 
 0.540
LOC107583385
Beta-galactosidase-1-like protein 2.
  
 
 0.537
ENSSGRP00000064933
Beta-galactosidase-like.
  
 
 0.535
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.