Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001346Galactosidase, alpha. (276 aa)    
Predicted Functional Partners:
glb1
Beta-galactosidase.
  
 
 0.978
ENSSGRP00000038976
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II).
     
 0.928
ENSSGRP00000047565
Neutral alpha-glucosidase C-like.
     
 0.928
ENSSGRP00000034235
Beta-hexosaminidase subunit beta-like.
  
 
 0.927
ENSSGRP00000087985
Hexosaminidase B (beta polypeptide).
  
 
 0.927
ENSSGRP00000073858
Galactocerebrosidase-like.
     
 0.920
LOC107588298
Galactocerebrosidase-like.
     
 0.920
ENSSGRP00000109990
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6.
     
 0.917
LOC107573096
Sialidase-4-like.
     
  0.912
LOC107595259
Beta-hexosaminidase subunit alpha-like.
   
 
 0.912
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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