Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001396ADP-ribosylation factor-like protein 6-interacting protein 1 isoform X1. (195 aa)    
Predicted Functional Partners:
LOC107549111
Small subunit ribosomal protein S7e.
   
 0.995
FAU
Small subunit ribosomal protein S30e.
   
 0.993
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
 0.993
LOC107567395
Small subunit ribosomal protein S30e.
   
 0.993
LOC107555153
Small subunit ribosomal protein S30e.
   
 0.993
LOC107567812
40S ribosomal protein S18-like.
  
 0.987
LOC107560304
Small subunit ribosomal protein S16e.
  
 0.987
rps18
Small subunit ribosomal protein S18e.
  
 0.987
LOC107583605
Small subunit ribosomal protein S2e.
  
 0.987
LOC107555664
40S ribosomal protein S2 isoform X1.
  
 0.987
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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