Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107554852Transmembrane protein C5orf28 homolog. (235 aa)    
Predicted Functional Partners:
ENSSGRP00000037470
annotation not available
      
 0.698
ENSSGRP00000092169
FYN binding protein b.
      
 0.649
LOC107558705
Potassium voltage-gated channel subfamily V member 2-like.
      
 0.614
LOC107571028
LMBR1 domain-containing protein 2-B-like.
      
 0.614
ENSSGRP00000034043
Coactivator-associated arginine methyltransferase 1, like.
      
 0.605
LOC107558244
Histone-arginine methyltransferase CARM1-like.
      
 0.605
hdhd2
Haloacid dehalogenase-like hydrolase domain-containing protein 2.
      
 0.580
ENSSGRP00000057680
Haloacid dehalogenase-like hydrolase domain containing 2.
      
 0.580
prxl2c
Thioredoxin-like protein AAED1.
      
 0.554
ENSSGRP00000035524
Leukemia inhibitory factor receptor-like.
      
 0.547
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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