Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107566178V-type H+-transporting ATPase S1 subunit. (466 aa)    
Predicted Functional Partners:
LOC107599895
V-type proton ATPase 21 kDa proteolipid subunit.
   
 0.988
ENSSGRP00000060964
V-type H+-transporting ATPase 21kDa proteolipid subunit.
   
 0.988
LOC107563463
V-type H+-transporting ATPase subunit d.
   
 0.987
LOC107548952
V-type H+-transporting ATPase subunit d.
   
 0.987
Atp6v1h
V-type proton ATPase subunit H isoform X1.
   
 0.984
ENSSGRP00000070730
V-type H+-transporting ATPase subunit H.
   
 0.984
atp6v0c
V-type H+-transporting ATPase 16kDa proteolipid subunit.
   
 0.984
LOC107566902
V-type H+-transporting ATPase subunit G.
   
 0.982
LOC107567372
V-type H+-transporting ATPase 16kDa proteolipid subunit.
   
 0.980
LOC107552490
V-type H+-transporting ATPase 16kDa proteolipid subunit.
   
 0.980
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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