Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107554853Ciliary neurotrophic factor receptor subunit alpha-like. (373 aa)    
Predicted Functional Partners:
ENSSGRP00000103245
Cardiotrophin-like cytokine factor 1.
     
 0.923
ENSSGRP00000000607
Interleukin-6 receptor subunit beta-like.
     
  0.912
clcf1
Cardiotrophin-like cytokine factor 1.
     
 0.907
LOC107598316
Uncharacterized protein LOC107598316.
     
 0.900
LOC107587449
Uncharacterized protein LOC107587449.
     
 0.900
ENSSGRP00000035524
Leukemia inhibitory factor receptor-like.
    
 0.898
ENSSGRP00000067243
LIF receptor subunit alpha a.
    
 0.898
ENSSGRP00000035530
Oncostatin M receptor.
     
 0.897
LOC107560412
Interleukin-6 receptor subunit beta-like.
    
  0.897
LOC107558262
Interleukin-6 receptor subunit beta-like.
    
  0.897
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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