Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107566179Troponin C, slow skeletal and cardiac muscles. (162 aa)    
Predicted Functional Partners:
ENSSGRP00000004999
Troponin T, cardiac muscle isoforms-like.
   
 0.972
ENSSGRP00000005771
Troponin I type 1a (skeletal, slow).
   
 0.971
ENSSGRP00000045936
Troponin I, slow skeletal muscle-like.
   
 0.971
LOC107598157
Troponin I, slow skeletal muscle-like.
   
 0.971
ENSSGRP00000098961
Troponin I, slow skeletal muscle-like.
   
 0.971
ENSSGRP00000005763
Troponin T, cardiac muscle-like.
   
 0.967
ENSSGRP00000097994
Troponin T type 2a (cardiac).
   
 0.967
ENSSGRP00000006623
Troponin T, cardiac muscle isoforms-like.
   
 0.960
ENSSGRP00000000104
Troponin T2c, cardiac.
   
 0.959
LOC107560724
Troponin T, cardiac muscle-like isoform X1.
   
 0.959
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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