STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001414Solute carrier family 6 (neurotransmitter transporter, GABA) member 1. (406 aa)    
Predicted Functional Partners:
ENSSGRP00000074990
Gamma-crystallin M2-like isoform X1.
      
 0.652
ENSSGRP00000006944
Lens fiber membrane intrinsic protein-like.
      
 0.625
LOC107597599
Lens fiber membrane intrinsic protein-like isoform X1.
      
 0.625
LOC107551849
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 isoform X1.
      
 0.615
ENSSGRP00000011077
annotation not available
  
 
  0.575
ENSSGRP00000067662
Solute carrier family 6 member 15.
  
 
  0.573
ENSSGRP00000055872
Solute carrier family 6 (neurotransmitter transporter, GABA) member 13.
  
 
  0.564
ENSSGRP00000058962
Solute carrier family 6 member 22, tandem duplicate 1.
  
  
  0.554
LOC107570615
Sodium- and chloride-dependent GABA transporter 1-like.
  
    0.541
ENSSGRP00000057584
annotation not available
  
  
  0.537
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.