STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107566196Cysteine/serine-rich nuclear protein 1-like. (569 aa)    
Predicted Functional Partners:
LOC107597151
Growth arrest and DNA damage-inducible protein GADD45 beta-like.
   
  
 0.854
Smtn
Smoothelin isoform X1.
      
 0.619
ENSSGRP00000085479
Zinc finger protein 185 with LIM domain.
      
 0.619
LOC107575291
Homeobox protein MSX-2-like.
      
 0.615
ENSSGRP00000066664
Muscle segment homeobox 1a.
      
 0.615
cutc
Copper homeostasis protein cutC homolog.
      
 0.489
LOC107556218
AT-rich interactive domain-containing protein 5A-like.
   
  
 0.468
ENSSGRP00000012751
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta.
   
  
 0.424
LOC107568930
Ubiquitin domain-containing protein UBFD1-like.
      
 0.418
ENSSGRP00000027443
Transcription factor jun-B-like.
   
    0.418
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.