Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107566196Cysteine/serine-rich nuclear protein 1-like. (569 aa)    
Predicted Functional Partners:
LOC107597151
Growth arrest and DNA damage-inducible protein GADD45 beta-like.
   
  
 0.759
Smtn
Smoothelin isoform X1.
      
 0.654
LOC107563994
Serine/threonine-protein phosphatase alpha-2 isoform.
    
   0.646
LOC107563994-2
Serine/threonine-protein phosphatase alpha-2 isoform.
    
   0.646
LOC107567955
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit B isoform X1.
    
   0.646
LOC107556769
Serine/threonine-protein phosphatase alpha-2 isoform-like isoform X1.
    
   0.646
ENSSGRP00000103778
annotation not available
    
   0.646
LOC107551850
Serine/threonine-protein phosphatase alpha-2 isoform-like.
    
   0.646
LOC107583611
Serine/threonine-protein phosphatase PP1-beta catalytic subunit-like.
    
   0.644
ENSSGRP00000033486
annotation not available
    
   0.644
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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