STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000001421Opsin 1 (cone pigments), short-wave-sensitive 1. (238 aa)    
Predicted Functional Partners:
LOC107550493
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
   
 0.854
LOC107591823
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
   
 0.854
ENSSGRP00000069064
Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.
   
 0.812
ENSSGRP00000074480
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.673
Gnat1
Guanine nucleotide-binding protein G(t) subunit alpha 1/2.
   
 0.673
gng10
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10.
    
  0.659
LOC107585363
RPE-retinal G protein-coupled receptor-like.
   
 
 0.633
LOC107588645
RPE-retinal G protein-coupled receptor-like.
   
 
 0.633
Anapc1
Anaphase-promoting complex subunit 1.
      
 0.607
LOC107571763
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2-like.
   
 0.581
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.