STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekhm2Pleckstrin homology domain-containing family M member 2 isoform X1. (1020 aa)    
Predicted Functional Partners:
ENSSGRP00000017666
Ras-related protein Rab-9B-like.
     
  0.900
rab9a
Ras-related protein Rab-9A.
     
  0.900
LOC107552379
Ras-related protein Rab-9A-like.
     
  0.900
LOC107564302
Ras-related protein Rab-9A-like.
     
  0.900
LOC107554658
Ras-related protein Rab-9B-like.
     
  0.900
LOC107588842
Ras-related protein Rab-9A-like.
     
  0.900
ENSSGRP00000030473
Polyubiquitin-C isoform X1.
   
 
 0.890
ENSSGRP00000089091
Polyubiquitin-B-like isoform X1.
   
 
 0.890
LOC107567735
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 
 0.777
ENSSGRP00000004833
annotation not available
   
 
 0.777
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.